Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf139Q7TMV1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf139Q7TMV1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf139Q7TMV1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf139Q7TMV1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rnf139Q7TMV1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf139Q7TMV1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rnf139Q7TMV1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf139Q7TMV1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.71■□□□□ 0.59
Rnf139Q7TMV1 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.71■□□□□ 0.59
Rnf139Q7TMV1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf139Q7TMV1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf139Q7TMV1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rnf139Q7TMV1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 Gm715-201ENSMUST00000117865 831 ntBASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms