Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Vma21Q78T54 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Vma21Q78T54 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.3□□□□□ -0.12
Vma21Q78T54 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.3□□□□□ -0.12
Vma21Q78T54 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.3□□□□□ -0.12
Vma21Q78T54 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.3□□□□□ -0.12
Vma21Q78T54 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vma21Q78T54 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.29□□□□□ -0.12
Vma21Q78T54 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.29□□□□□ -0.12
Vma21Q78T54 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.29□□□□□ -0.12
Vma21Q78T54 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Gm5874-201ENSMUST00000096101 508 ntBASIC14.29□□□□□ -0.12
Vma21Q78T54 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vma21Q78T54 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vma21Q78T54 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.28□□□□□ -0.12
Vma21Q78T54 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vma21Q78T54 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.28□□□□□ -0.12
Vma21Q78T54 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.28□□□□□ -0.12
Vma21Q78T54 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.28□□□□□ -0.12
Vma21Q78T54 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vma21Q78T54 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vma21Q78T54 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vma21Q78T54 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vma21Q78T54 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vma21Q78T54 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.27□□□□□ -0.12
Vma21Q78T54 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vma21Q78T54 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vma21Q78T54 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.27□□□□□ -0.12
Vma21Q78T54 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vma21Q78T54 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vma21Q78T54 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vma21Q78T54 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vma21Q78T54 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vma21Q78T54 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.27□□□□□ -0.13
Vma21Q78T54 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vma21Q78T54 AV356131-201ENSMUST00000206201 750 ntBASIC14.27□□□□□ -0.13
Vma21Q78T54 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vma21Q78T54 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vma21Q78T54 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vma21Q78T54 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vma21Q78T54 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vma21Q78T54 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vma21Q78T54 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vma21Q78T54 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.26□□□□□ -0.13
Vma21Q78T54 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vma21Q78T54 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.26□□□□□ -0.13
Vma21Q78T54 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.26□□□□□ -0.13
Vma21Q78T54 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Vma21Q78T54 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms