Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm8Q6ZWM4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm8Q6ZWM4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Lsm8Q6ZWM4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm8Q6ZWM4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.4■□□□□ 0.54
Lsm8Q6ZWM4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lsm8Q6ZWM4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lsm8Q6ZWM4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Gm10698-201ENSMUST00000182663 604 ntBASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Gm43183-201ENSMUST00000200632 547 ntBASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm8Q6ZWM4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm8Q6ZWM4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Gm4974-201ENSMUST00000209974 875 ntBASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm8Q6ZWM4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm8Q6ZWM4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Lsm8Q6ZWM4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm8Q6ZWM4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm8Q6ZWM4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.36■□□□□ 0.53
Lsm8Q6ZWM4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.36■□□□□ 0.53
Lsm8Q6ZWM4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm8Q6ZWM4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm8Q6ZWM4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Lsm8Q6ZWM4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm8Q6ZWM4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Gm13168-201ENSMUST00000121771 632 ntBASIC18.34■□□□□ 0.53
Lsm8Q6ZWM4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms