Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Gm10653-202ENSMUST00000139570 835 ntBASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Gm44549-201ENSMUST00000208351 577 ntBASIC20.94■□□□□ 0.94
Casc1Q6TDU8 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc1Q6TDU8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc1Q6TDU8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Casc1Q6TDU8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc1Q6TDU8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.9■□□□□ 0.94
Casc1Q6TDU8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Casc1Q6TDU8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Casc1Q6TDU8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.89■□□□□ 0.94
Casc1Q6TDU8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Casc1Q6TDU8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Casc1Q6TDU8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Casc1Q6TDU8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc1Q6TDU8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Casc1Q6TDU8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms