Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup98Q6PFD9 Gm8587-201ENSMUST00000076538 843 ntBASIC20.75■□□□□ 0.91
Nup98Q6PFD9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup98Q6PFD9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Nup98Q6PFD9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup98Q6PFD9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Gm27389-201ENSMUST00000183622 195 ntBASIC20.74■□□□□ 0.91
Nup98Q6PFD9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Gm29518-201ENSMUST00000190858 372 ntBASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Gm37722-201ENSMUST00000193757 208 ntBASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup98Q6PFD9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup98Q6PFD9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Gm17971-201ENSMUST00000190239 806 ntBASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup98Q6PFD9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup98Q6PFD9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Nup98Q6PFD9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup98Q6PFD9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup98Q6PFD9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup98Q6PFD9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Gm25016-201ENSMUST00000158399 131 ntBASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Gm17808-201ENSMUST00000200859 894 ntBASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Gm9103-201ENSMUST00000119371 405 ntBASIC20.69■□□□□ 0.9
Nup98Q6PFD9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup98Q6PFD9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup98Q6PFD9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nup98Q6PFD9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup98Q6PFD9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup98Q6PFD9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Nup98Q6PFD9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms