Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcc2Q6PDG5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc2Q6PDG5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Mir6349-201ENSMUST00000184059 97 ntBASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc2Q6PDG5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc2Q6PDG5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
Smarcc2Q6PDG5 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.41■□□□□ 0.86
Smarcc2Q6PDG5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.41■□□□□ 0.86
Smarcc2Q6PDG5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc2Q6PDG5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc2Q6PDG5 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.41■□□□□ 0.86
Smarcc2Q6PDG5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc2Q6PDG5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Smarcc2Q6PDG5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc2Q6PDG5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarcc2Q6PDG5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Smarcc2Q6PDG5 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.39■□□□□ 0.86
Smarcc2Q6PDG5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarcc2Q6PDG5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarcc2Q6PDG5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Gm15375-201ENSMUST00000119510 849 ntBASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc2Q6PDG5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms