Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Gm10138-203ENSMUST00000206952 366 ntBASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sp140Q6NSQ5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Gm20049-201ENSMUST00000219950 730 ntBASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Sp140Q6NSQ5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Gm10418-201ENSMUST00000100943 576 ntBASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Gm15375-201ENSMUST00000119510 849 ntBASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Sp140Q6NSQ5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sp140Q6NSQ5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sp140Q6NSQ5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sp140Q6NSQ5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Sp140Q6NSQ5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Sp140Q6NSQ5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Gm12441-201ENSMUST00000121806 588 ntBASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Sp140Q6NSQ5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Mir6349-201ENSMUST00000184059 97 ntBASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sp140Q6NSQ5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sp140Q6NSQ5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms