Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SpenQ62504 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.61■□□□□ 0.09
SpenQ62504 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.6■□□□□ 0.09
SpenQ62504 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SpenQ62504 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.6■□□□□ 0.09
SpenQ62504 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.6■□□□□ 0.09
SpenQ62504 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SpenQ62504 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SpenQ62504 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SpenQ62504 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SpenQ62504 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SpenQ62504 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Gm11594-201ENSMUST00000122313 162 ntBASIC15.59■□□□□ 0.09
SpenQ62504 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.59■□□□□ 0.09
SpenQ62504 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.59■□□□□ 0.09
SpenQ62504 Gm4974-201ENSMUST00000209974 875 ntBASIC15.59■□□□□ 0.09
SpenQ62504 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SpenQ62504 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SpenQ62504 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SpenQ62504 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SpenQ62504 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.58■□□□□ 0.09
SpenQ62504 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SpenQ62504 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.58■□□□□ 0.09
SpenQ62504 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SpenQ62504 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SpenQ62504 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SpenQ62504 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SpenQ62504 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SpenQ62504 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SpenQ62504 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SpenQ62504 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.58■□□□□ 0.08
SpenQ62504 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SpenQ62504 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SpenQ62504 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SpenQ62504 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.57■□□□□ 0.08
SpenQ62504 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.57■□□□□ 0.08
SpenQ62504 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.57■□□□□ 0.08
SpenQ62504 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SpenQ62504 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.57■□□□□ 0.08
SpenQ62504 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.57■□□□□ 0.08
SpenQ62504 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.57■□□□□ 0.08
SpenQ62504 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.57■□□□□ 0.08
SpenQ62504 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SpenQ62504 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
SpenQ62504 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SpenQ62504 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SpenQ62504 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SpenQ62504 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SpenQ62504 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SpenQ62504 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SpenQ62504 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SpenQ62504 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SpenQ62504 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SpenQ62504 Gm7063-201ENSMUST00000186840 981 ntBASIC15.56■□□□□ 0.08
SpenQ62504 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.56■□□□□ 0.08
SpenQ62504 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SpenQ62504 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SpenQ62504 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SpenQ62504 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SpenQ62504 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms