Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndufa4Q62425 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ndufa4Q62425 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndufa4Q62425 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndufa4Q62425 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.74□□□□□ -0.37
Ndufa4Q62425 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.74□□□□□ -0.37
Ndufa4Q62425 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa4Q62425 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa4Q62425 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.73□□□□□ -0.37
Ndufa4Q62425 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa4Q62425 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa4Q62425 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa4Q62425 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa4Q62425 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ndufa4Q62425 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.71□□□□□ -0.37
Ndufa4Q62425 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ndufa4Q62425 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa4Q62425 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ndufa4Q62425 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa4Q62425 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms