Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn9aQ62205 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.73■□□□□ 0.91
Scn9aQ62205 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Scn9aQ62205 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn9aQ62205 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn9aQ62205 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn9aQ62205 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Scn9aQ62205 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn9aQ62205 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn9aQ62205 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.71■□□□□ 0.91
Scn9aQ62205 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn9aQ62205 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn9aQ62205 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn9aQ62205 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn9aQ62205 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn9aQ62205 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn9aQ62205 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn9aQ62205 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Scn9aQ62205 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Scn9aQ62205 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Scn9aQ62205 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn9aQ62205 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Scn9aQ62205 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Scn9aQ62205 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Scn9aQ62205 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Scn9aQ62205 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Scn9aQ62205 Gm18733-201ENSMUST00000173950 856 ntBASIC20.7■□□□□ 0.9
Scn9aQ62205 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.7■□□□□ 0.9
Scn9aQ62205 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Scn9aQ62205 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn9aQ62205 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn9aQ62205 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.7■□□□□ 0.9
Scn9aQ62205 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.7■□□□□ 0.9
Scn9aQ62205 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn9aQ62205 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn9aQ62205 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn9aQ62205 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn9aQ62205 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn9aQ62205 Gm27525-201ENSMUST00000184465 107 ntBASIC20.7■□□□□ 0.9
Scn9aQ62205 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn9aQ62205 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn9aQ62205 Idnk-204ENSMUST00000226010 1898 ntBASIC20.69■□□□□ 0.9
Scn9aQ62205 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scn9aQ62205 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Scn9aQ62205 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Scn9aQ62205 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Scn9aQ62205 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.69■□□□□ 0.9
Scn9aQ62205 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Scn9aQ62205 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn9aQ62205 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn9aQ62205 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn9aQ62205 Mir8112-201ENSMUST00000184382 131 ntBASIC20.68■□□□□ 0.9
Scn9aQ62205 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.68■□□□□ 0.9
Scn9aQ62205 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn9aQ62205 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn9aQ62205 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn9aQ62205 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn9aQ62205 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.68■□□□□ 0.9
Scn9aQ62205 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn9aQ62205 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn9aQ62205 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn9aQ62205 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn9aQ62205 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn9aQ62205 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.67■□□□□ 0.9
Scn9aQ62205 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn9aQ62205 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn9aQ62205 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Scn9aQ62205 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn9aQ62205 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn9aQ62205 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn9aQ62205 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.66■□□□□ 0.9
Scn9aQ62205 Gm43347-201ENSMUST00000200226 580 ntBASIC20.66■□□□□ 0.9
Scn9aQ62205 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn9aQ62205 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn9aQ62205 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn9aQ62205 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn9aQ62205 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn9aQ62205 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms