Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Gm10052-201ENSMUST00000168019 960 ntBASIC16.51■□□□□ 0.23
VcanQ62059 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VcanQ62059 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Gm7729-201ENSMUST00000050143 801 ntBASIC16.51■□□□□ 0.23
VcanQ62059 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
VcanQ62059 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VcanQ62059 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
VcanQ62059 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VcanQ62059 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Gm2213-201ENSMUST00000197485 688 ntBASIC16.5■□□□□ 0.23
VcanQ62059 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VcanQ62059 Gm10175-201ENSMUST00000086013 645 ntBASIC16.5■□□□□ 0.23
VcanQ62059 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VcanQ62059 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.49■□□□□ 0.23
VcanQ62059 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VcanQ62059 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VcanQ62059 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VcanQ62059 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VcanQ62059 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VcanQ62059 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VcanQ62059 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
VcanQ62059 Actl10-202ENSMUST00000226583 1501 ntBASIC16.48■□□□□ 0.23
VcanQ62059 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VcanQ62059 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VcanQ62059 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.48■□□□□ 0.23
VcanQ62059 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.48■□□□□ 0.23
VcanQ62059 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VcanQ62059 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.48■□□□□ 0.23
VcanQ62059 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.48■□□□□ 0.23
VcanQ62059 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VcanQ62059 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VcanQ62059 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VcanQ62059 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
VcanQ62059 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VcanQ62059 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.47■□□□□ 0.23
VcanQ62059 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.47■□□□□ 0.23
VcanQ62059 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.47■□□□□ 0.23
VcanQ62059 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.47■□□□□ 0.23
VcanQ62059 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VcanQ62059 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.46■□□□□ 0.23
VcanQ62059 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VcanQ62059 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.46■□□□□ 0.23
VcanQ62059 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.46■□□□□ 0.23
VcanQ62059 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VcanQ62059 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VcanQ62059 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VcanQ62059 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VcanQ62059 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VcanQ62059 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms