Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxn1Q61575 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Foxn1Q61575 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Foxn1Q61575 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Foxn1Q61575 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxn1Q61575 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxn1Q61575 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Foxn1Q61575 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxn1Q61575 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Foxn1Q61575 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxn1Q61575 Gm11594-201ENSMUST00000122313 162 ntBASIC20.01■□□□□ 0.79
Foxn1Q61575 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.01■□□□□ 0.79
Foxn1Q61575 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.01■□□□□ 0.79
Foxn1Q61575 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Foxn1Q61575 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxn1Q61575 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxn1Q61575 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxn1Q61575 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Gm38345-201ENSMUST00000192635 1748 ntBASIC20■□□□□ 0.79
Foxn1Q61575 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Foxn1Q61575 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Gm37025-201ENSMUST00000195159 829 ntBASIC20■□□□□ 0.79
Foxn1Q61575 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20■□□□□ 0.79
Foxn1Q61575 Actl10-202ENSMUST00000226583 1501 ntBASIC20■□□□□ 0.79
Foxn1Q61575 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Foxn1Q61575 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Foxn1Q61575 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxn1Q61575 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxn1Q61575 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Foxn1Q61575 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Gm2213-201ENSMUST00000197485 688 ntBASIC19.99■□□□□ 0.79
Foxn1Q61575 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Foxn1Q61575 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxn1Q61575 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Foxn1Q61575 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Foxn1Q61575 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Foxn1Q61575 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.98■□□□□ 0.79
Foxn1Q61575 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Foxn1Q61575 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Foxn1Q61575 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.98■□□□□ 0.79
Foxn1Q61575 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.98■□□□□ 0.79
Foxn1Q61575 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.98■□□□□ 0.79
Foxn1Q61575 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.98■□□□□ 0.79
Foxn1Q61575 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.98■□□□□ 0.79
Foxn1Q61575 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Foxn1Q61575 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxn1Q61575 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.97■□□□□ 0.79
Foxn1Q61575 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Foxn1Q61575 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxn1Q61575 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxn1Q61575 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.97■□□□□ 0.79
Foxn1Q61575 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.97■□□□□ 0.79
Foxn1Q61575 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Foxn1Q61575 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Foxn1Q61575 Gm8000-201ENSMUST00000188378 592 ntBASIC19.97■□□□□ 0.79
Foxn1Q61575 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxn1Q61575 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxn1Q61575 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxn1Q61575 Iqck-206ENSMUST00000208658 2891 ntBASIC19.97■□□□□ 0.79
Foxn1Q61575 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxn1Q61575 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxn1Q61575 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Foxn1Q61575 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Foxn1Q61575 Gm1401-201ENSMUST00000122048 772 ntBASIC19.96■□□□□ 0.79
Foxn1Q61575 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.96■□□□□ 0.79
Foxn1Q61575 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Foxn1Q61575 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.96■□□□□ 0.79
Foxn1Q61575 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.96■□□□□ 0.79
Foxn1Q61575 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Foxn1Q61575 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxn1Q61575 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.96■□□□□ 0.79
Foxn1Q61575 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxn1Q61575 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Foxn1Q61575 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms