Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Foxc1Q61572 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Foxc1Q61572 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.86□□□□□ -0.35
Foxc1Q61572 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.86□□□□□ -0.35
Foxc1Q61572 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Foxc1Q61572 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Fst-202ENSMUST00000223640 2612 ntBASIC12.86□□□□□ -0.35
Foxc1Q61572 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Foxc1Q61572 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Foxc1Q61572 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.85□□□□□ -0.35
Foxc1Q61572 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Gm6576-201ENSMUST00000169678 883 ntBASIC12.85□□□□□ -0.35
Foxc1Q61572 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.85□□□□□ -0.35
Foxc1Q61572 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Foxc1Q61572 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Foxc1Q61572 Zfp783-201ENSMUST00000095946 670 ntBASIC12.85□□□□□ -0.35
Foxc1Q61572 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Foxc1Q61572 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.85□□□□□ -0.35
Foxc1Q61572 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.85□□□□□ -0.35
Foxc1Q61572 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Foxc1Q61572 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Foxc1Q61572 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Foxc1Q61572 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Foxc1Q61572 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Gm11927-201ENSMUST00000118472 759 ntBASIC12.84□□□□□ -0.35
Foxc1Q61572 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxc1Q61572 Gm28196-201ENSMUST00000187719 640 ntBASIC12.84□□□□□ -0.35
Foxc1Q61572 Gm18666-201ENSMUST00000190039 958 ntBASIC12.84□□□□□ -0.35
Foxc1Q61572 Gm38285-201ENSMUST00000192928 922 ntBASIC12.84□□□□□ -0.35
Foxc1Q61572 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.84□□□□□ -0.35
Foxc1Q61572 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.84□□□□□ -0.35
Foxc1Q61572 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Foxc1Q61572 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Foxc1Q61572 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Foxc1Q61572 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Foxc1Q61572 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Foxc1Q61572 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Foxc1Q61572 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Foxc1Q61572 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Gm11249-201ENSMUST00000117071 859 ntBASIC12.83□□□□□ -0.36
Foxc1Q61572 Gm13158-201ENSMUST00000122007 736 ntBASIC12.83□□□□□ -0.36
Foxc1Q61572 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.83□□□□□ -0.36
Foxc1Q61572 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms