Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm22325-201ENSMUST00000158904 308 ntBASIC16.49■□□□□ 0.23
Sox17Q61473 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.49■□□□□ 0.23
Sox17Q61473 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.49■□□□□ 0.23
Sox17Q61473 Gm45417-201ENSMUST00000209533 758 ntBASIC16.49■□□□□ 0.23
Sox17Q61473 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Sox17Q61473 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sox17Q61473 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.49■□□□□ 0.23
Sox17Q61473 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox17Q61473 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sox17Q61473 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sox17Q61473 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sox17Q61473 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.48■□□□□ 0.23
Sox17Q61473 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.48■□□□□ 0.23
Sox17Q61473 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.48■□□□□ 0.23
Sox17Q61473 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sox17Q61473 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Sox17Q61473 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox17Q61473 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sox17Q61473 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sox17Q61473 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sox17Q61473 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Sox17Q61473 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Sox17Q61473 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.47■□□□□ 0.23
Sox17Q61473 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.47■□□□□ 0.23
Sox17Q61473 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sox17Q61473 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Sox17Q61473 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.46■□□□□ 0.23
Sox17Q61473 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.46■□□□□ 0.23
Sox17Q61473 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.46■□□□□ 0.23
Sox17Q61473 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Sox17Q61473 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.46■□□□□ 0.23
Sox17Q61473 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Sox17Q61473 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox17Q61473 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sox17Q61473 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Sox17Q61473 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Sox17Q61473 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Gm12821-201ENSMUST00000120022 600 ntBASIC16.45■□□□□ 0.22
Sox17Q61473 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sox17Q61473 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms