Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Gm27389-201ENSMUST00000183622 195 ntBASIC17.26■□□□□ 0.35
Cacna1eQ61290 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cacna1eQ61290 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.26■□□□□ 0.35
Cacna1eQ61290 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.25■□□□□ 0.35
Cacna1eQ61290 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.25■□□□□ 0.35
Cacna1eQ61290 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.25■□□□□ 0.35
Cacna1eQ61290 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1eQ61290 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1eQ61290 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Cacna1eQ61290 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.24■□□□□ 0.35
Cacna1eQ61290 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1eQ61290 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.24■□□□□ 0.35
Cacna1eQ61290 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1eQ61290 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cacna1eQ61290 Gm11355-201ENSMUST00000121120 306 ntBASIC17.24■□□□□ 0.35
Cacna1eQ61290 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1eQ61290 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1eQ61290 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cacna1eQ61290 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1eQ61290 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1eQ61290 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1eQ61290 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1eQ61290 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.23■□□□□ 0.35
Cacna1eQ61290 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1eQ61290 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.23■□□□□ 0.35
Cacna1eQ61290 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cacna1eQ61290 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1eQ61290 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cacna1eQ61290 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1eQ61290 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1eQ61290 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Gm37722-201ENSMUST00000193757 208 ntBASIC17.22■□□□□ 0.35
Cacna1eQ61290 Gm18669-201ENSMUST00000216049 778 ntBASIC17.22■□□□□ 0.35
Cacna1eQ61290 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1eQ61290 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Gm11950-201ENSMUST00000121615 838 ntBASIC17.21■□□□□ 0.35
Cacna1eQ61290 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna1eQ61290 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cacna1eQ61290 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1eQ61290 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1eQ61290 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1eQ61290 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cacna1eQ61290 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1eQ61290 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1eQ61290 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1eQ61290 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1eQ61290 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1eQ61290 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna1eQ61290 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.19■□□□□ 0.34
Cacna1eQ61290 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1eQ61290 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1eQ61290 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1eQ61290 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1eQ61290 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna1eQ61290 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cacna1eQ61290 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms