Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Irf9Q61179 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Irf9Q61179 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Irf9Q61179 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Irf9Q61179 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Irf9Q61179 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.84■■□□□ 1.09
Irf9Q61179 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Irf9Q61179 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Irf9Q61179 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Irf9Q61179 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Irf9Q61179 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.83■■□□□ 1.09
Irf9Q61179 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Irf9Q61179 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Irf9Q61179 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.83■■□□□ 1.09
Irf9Q61179 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Irf9Q61179 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Irf9Q61179 Gm18032-201ENSMUST00000222541 538 ntBASIC21.83■■□□□ 1.09
Irf9Q61179 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.83■■□□□ 1.09
Irf9Q61179 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Irf9Q61179 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Irf9Q61179 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Irf9Q61179 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.83■■□□□ 1.08
Irf9Q61179 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Irf9Q61179 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Irf9Q61179 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Irf9Q61179 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Irf9Q61179 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Irf9Q61179 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Irf9Q61179 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.82■■□□□ 1.08
Irf9Q61179 Il3ra-202ENSMUST00000223589 738 ntBASIC21.82■■□□□ 1.08
Irf9Q61179 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.82■■□□□ 1.08
Irf9Q61179 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Irf9Q61179 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Irf9Q61179 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Irf9Q61179 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Irf9Q61179 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.81■■□□□ 1.08
Irf9Q61179 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Irf9Q61179 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Irf9Q61179 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Irf9Q61179 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Irf9Q61179 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.81■■□□□ 1.08
Irf9Q61179 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Irf9Q61179 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Irf9Q61179 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.81■■□□□ 1.08
Irf9Q61179 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Irf9Q61179 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.81■■□□□ 1.08
Irf9Q61179 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Irf9Q61179 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.8■■□□□ 1.08
Irf9Q61179 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Irf9Q61179 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Irf9Q61179 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Irf9Q61179 Gm6659-201ENSMUST00000174752 547 ntBASIC21.8■■□□□ 1.08
Irf9Q61179 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.8■■□□□ 1.08
Irf9Q61179 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.8■■□□□ 1.08
Irf9Q61179 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Irf9Q61179 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Irf9Q61179 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Irf9Q61179 Gm17661-201ENSMUST00000170317 270 ntBASIC21.79■■□□□ 1.08
Irf9Q61179 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.79■■□□□ 1.08
Irf9Q61179 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.79■■□□□ 1.08
Irf9Q61179 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Irf9Q61179 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Irf9Q61179 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf9Q61179 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Irf9Q61179 Gm16061-201ENSMUST00000122167 857 ntBASIC21.78■■□□□ 1.08
Irf9Q61179 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.78■■□□□ 1.08
Irf9Q61179 Gm7370-201ENSMUST00000219471 767 ntBASIC21.78■■□□□ 1.08
Irf9Q61179 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf9Q61179 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf9Q61179 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Irf9Q61179 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf9Q61179 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf9Q61179 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf9Q61179 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Irf9Q61179 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.78■■□□□ 1.08
Irf9Q61179 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Irf9Q61179 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Irf9Q61179 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Irf9Q61179 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
Irf9Q61179 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Irf9Q61179 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms