Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ptch1Q61115 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptch1Q61115 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptch1Q61115 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ptch1Q61115 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC25.35■■□□□ 1.65
Ptch1Q61115 Gm15372-201ENSMUST00000120729 834 ntBASIC25.35■■□□□ 1.65
Ptch1Q61115 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptch1Q61115 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptch1Q61115 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC25.35■■□□□ 1.65
Ptch1Q61115 Vti1a-206ENSMUST00000225529 1244 ntBASIC25.35■■□□□ 1.65
Ptch1Q61115 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptch1Q61115 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptch1Q61115 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ptch1Q61115 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ptch1Q61115 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ptch1Q61115 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ptch1Q61115 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ptch1Q61115 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC25.34■■□□□ 1.65
Ptch1Q61115 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC25.34■■□□□ 1.65
Ptch1Q61115 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptch1Q61115 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptch1Q61115 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptch1Q61115 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptch1Q61115 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC25.33■■□□□ 1.65
Ptch1Q61115 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptch1Q61115 BC021767-201ENSMUST00000126387 1716 ntBASIC25.33■■□□□ 1.65
Ptch1Q61115 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptch1Q61115 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC25.32■■□□□ 1.64
Ptch1Q61115 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC25.32■■□□□ 1.64
Ptch1Q61115 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ptch1Q61115 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC25.32■■□□□ 1.64
Ptch1Q61115 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ptch1Q61115 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC25.32■■□□□ 1.64
Ptch1Q61115 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Ptch1Q61115 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Ptch1Q61115 Rps4l-201ENSMUST00000071745 943 ntBASIC25.32■■□□□ 1.64
Ptch1Q61115 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Ptch1Q61115 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ptch1Q61115 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC25.32■■□□□ 1.64
Ptch1Q61115 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ptch1Q61115 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Ptch1Q61115 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ptch1Q61115 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Ptch1Q61115 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC25.31■■□□□ 1.64
Ptch1Q61115 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Ptch1Q61115 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC25.31■■□□□ 1.64
Ptch1Q61115 AC138767.1-201ENSMUST00000222661 415 ntBASIC25.31■■□□□ 1.64
Ptch1Q61115 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC25.31■■□□□ 1.64
Ptch1Q61115 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC25.31■■□□□ 1.64
Ptch1Q61115 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC25.31■■□□□ 1.64
Ptch1Q61115 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptch1Q61115 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ptch1Q61115 Gm7935-201ENSMUST00000100555 1278 ntBASIC25.3■■□□□ 1.64
Ptch1Q61115 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ptch1Q61115 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ptch1Q61115 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ptch1Q61115 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Ptch1Q61115 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ptch1Q61115 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Ptch1Q61115 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Ptch1Q61115 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ptch1Q61115 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptch1Q61115 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC25.29■■□□□ 1.64
Ptch1Q61115 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Ptch1Q61115 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC25.29■■□□□ 1.64
Ptch1Q61115 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ptch1Q61115 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptch1Q61115 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC25.29■■□□□ 1.64
Ptch1Q61115 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Ptch1Q61115 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC25.29■■□□□ 1.64
Ptch1Q61115 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC25.29■■□□□ 1.64
Ptch1Q61115 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Ptch1Q61115 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptch1Q61115 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Ptch1Q61115 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Ptch1Q61115 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC25.28■■□□□ 1.64
Ptch1Q61115 Gm1401-201ENSMUST00000122048 772 ntBASIC25.28■■□□□ 1.64
Ptch1Q61115 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms