Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Gm9731-201ENSMUST00000209480 747 ntBASIC17.38■□□□□ 0.37
Col12a1Q60847 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Col12a1Q60847 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.38■□□□□ 0.37
Col12a1Q60847 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.38■□□□□ 0.37
Col12a1Q60847 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col12a1Q60847 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Col12a1Q60847 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col12a1Q60847 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Col12a1Q60847 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.37■□□□□ 0.37
Col12a1Q60847 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.37■□□□□ 0.37
Col12a1Q60847 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.37■□□□□ 0.37
Col12a1Q60847 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 Golph3-202ENSMUST00000226517 2359 ntBASIC17.37■□□□□ 0.37
Col12a1Q60847 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col12a1Q60847 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col12a1Q60847 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.36■□□□□ 0.37
Col12a1Q60847 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Col12a1Q60847 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Gm4995-201ENSMUST00000117247 432 ntBASIC17.36■□□□□ 0.37
Col12a1Q60847 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.36■□□□□ 0.37
Col12a1Q60847 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col12a1Q60847 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Col12a1Q60847 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col12a1Q60847 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col12a1Q60847 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.34■□□□□ 0.37
Col12a1Q60847 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Col12a1Q60847 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col12a1Q60847 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Col12a1Q60847 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col12a1Q60847 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.34■□□□□ 0.37
Col12a1Q60847 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col12a1Q60847 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col12a1Q60847 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col12a1Q60847 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.34■□□□□ 0.37
Col12a1Q60847 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Col12a1Q60847 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col12a1Q60847 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.34■□□□□ 0.37
Col12a1Q60847 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col12a1Q60847 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Col12a1Q60847 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Col12a1Q60847 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col12a1Q60847 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col12a1Q60847 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Col12a1Q60847 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col12a1Q60847 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.33■□□□□ 0.37
Col12a1Q60847 Gm13401-201ENSMUST00000117074 291 ntBASIC17.33■□□□□ 0.37
Col12a1Q60847 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.33■□□□□ 0.37
Col12a1Q60847 Mir5131-201ENSMUST00000175426 93 ntBASIC17.33■□□□□ 0.37
Col12a1Q60847 Mir5126-201ENSMUST00000175513 77 ntBASIC17.33■□□□□ 0.37
Col12a1Q60847 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.33■□□□□ 0.37
Col12a1Q60847 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Col12a1Q60847 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col12a1Q60847 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col12a1Q60847 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Col12a1Q60847 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col12a1Q60847 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.33■□□□□ 0.36
Col12a1Q60847 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms