Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.83■□□□□ 0.45
Rnf43Q5NCP0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf43Q5NCP0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf43Q5NCP0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf43Q5NCP0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf43Q5NCP0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf43Q5NCP0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 BC021767-201ENSMUST00000126387 1716 ntBASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Gm9013-201ENSMUST00000132939 882 ntBASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Gm27389-201ENSMUST00000183622 195 ntBASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf43Q5NCP0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf43Q5NCP0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Gm27704-201ENSMUST00000185094 107 ntBASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Gm17971-201ENSMUST00000190239 806 ntBASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf43Q5NCP0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Gm13401-201ENSMUST00000117074 291 ntBASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf43Q5NCP0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms