Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Mir3081-201ENSMUST00000175305 84 ntBASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Srrm1Q52KI8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Mzt1-203ENSMUST00000227948 952 ntBASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Srrm1Q52KI8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Srrm1Q52KI8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Gm5867-201ENSMUST00000063197 592 ntBASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Srrm1Q52KI8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Gm11950-201ENSMUST00000121615 838 ntBASIC19.6■□□□□ 0.73
Srrm1Q52KI8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Srrm1Q52KI8 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Srrm1Q52KI8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Gm11355-201ENSMUST00000121120 306 ntBASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Srrm1Q52KI8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Srrm1Q52KI8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Srrm1Q52KI8 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.58■□□□□ 0.73
Srrm1Q52KI8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Srrm1Q52KI8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Srrm1Q52KI8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Srrm1Q52KI8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Srrm1Q52KI8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.58■□□□□ 0.73
Srrm1Q52KI8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Srrm1Q52KI8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms