Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Rarb-207ENSMUST00000225921 2756 ntBASIC20.34■□□□□ 0.85
Ddx49Q4FZF3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx49Q4FZF3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ddx49Q4FZF3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx49Q4FZF3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx49Q4FZF3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx49Q4FZF3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.33■□□□□ 0.85
Ddx49Q4FZF3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx49Q4FZF3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Ddx49Q4FZF3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx49Q4FZF3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx49Q4FZF3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx49Q4FZF3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.33■□□□□ 0.84
Ddx49Q4FZF3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx49Q4FZF3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx49Q4FZF3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Gm7213-201ENSMUST00000215977 950 ntBASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx49Q4FZF3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Gm13401-201ENSMUST00000117074 291 ntBASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Ddx49Q4FZF3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ddx49Q4FZF3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx49Q4FZF3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx49Q4FZF3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx49Q4FZF3 Gm44771-201ENSMUST00000206975 626 ntBASIC20.29■□□□□ 0.84
Ddx49Q4FZF3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx49Q4FZF3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ddx49Q4FZF3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx49Q4FZF3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx49Q4FZF3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx49Q4FZF3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx49Q4FZF3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ddx49Q4FZF3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms