Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Prpf38aQ4FK66 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Prpf38aQ4FK66 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf38aQ4FK66 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Prpf38aQ4FK66 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38aQ4FK66 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38aQ4FK66 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38aQ4FK66 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Prpf38aQ4FK66 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.46■□□□□ 0.87
Prpf38aQ4FK66 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38aQ4FK66 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 Gm37025-201ENSMUST00000195159 829 ntBASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Prpf38aQ4FK66 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Gm6659-201ENSMUST00000174752 547 ntBASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38aQ4FK66 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Mir8112-201ENSMUST00000184382 131 ntBASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Gm18032-201ENSMUST00000222541 538 ntBASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Grk6-206ENSMUST00000224995 2971 ntBASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf38aQ4FK66 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Gm9731-201ENSMUST00000209480 747 ntBASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Prpf38aQ4FK66 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Il3ra-202ENSMUST00000223589 738 ntBASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf38aQ4FK66 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Gm16061-201ENSMUST00000122167 857 ntBASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms