Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Golph3-202ENSMUST00000226517 2359 ntBASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam196aQ3USH1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam196aQ3USH1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Gm11594-201ENSMUST00000122313 162 ntBASIC17.55■□□□□ 0.4
Fam196aQ3USH1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam196aQ3USH1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.54■□□□□ 0.4
Fam196aQ3USH1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fam196aQ3USH1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Gm8000-201ENSMUST00000188378 592 ntBASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam196aQ3USH1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Gm1401-201ENSMUST00000122048 772 ntBASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Gm7063-201ENSMUST00000186840 981 ntBASIC17.52■□□□□ 0.4
Fam196aQ3USH1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam196aQ3USH1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms