Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smcr8Q3UMB5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smcr8Q3UMB5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smcr8Q3UMB5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.83■□□□□ 0.61
Smcr8Q3UMB5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smcr8Q3UMB5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Smcr8Q3UMB5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Smcr8Q3UMB5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smcr8Q3UMB5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smcr8Q3UMB5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Smcr8Q3UMB5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smcr8Q3UMB5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smcr8Q3UMB5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smcr8Q3UMB5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.83■□□□□ 0.6
Smcr8Q3UMB5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smcr8Q3UMB5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smcr8Q3UMB5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smcr8Q3UMB5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Gm4974-201ENSMUST00000209974 875 ntBASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smcr8Q3UMB5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smcr8Q3UMB5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smcr8Q3UMB5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Smcr8Q3UMB5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms