Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.43■□□□□ 0.22
Treml4Q3LRV9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.43■□□□□ 0.22
Treml4Q3LRV9 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.43■□□□□ 0.22
Treml4Q3LRV9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Treml4Q3LRV9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Treml4Q3LRV9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Treml4Q3LRV9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Treml4Q3LRV9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Treml4Q3LRV9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Treml4Q3LRV9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Treml4Q3LRV9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Gm9103-201ENSMUST00000119371 405 ntBASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Treml4Q3LRV9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Treml4Q3LRV9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Gm22697-201ENSMUST00000175194 63 ntBASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Mir2861-201ENSMUST00000175539 82 ntBASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.4■□□□□ 0.22
Treml4Q3LRV9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Treml4Q3LRV9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Treml4Q3LRV9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Gm12085-201ENSMUST00000119263 940 ntBASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Treml4Q3LRV9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms