Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim63Q38HM4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim63Q38HM4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.57□□□□□ -0.08
Trim63Q38HM4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.57□□□□□ -0.08
Trim63Q38HM4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim63Q38HM4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim63Q38HM4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.56□□□□□ -0.08
Trim63Q38HM4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Trim63Q38HM4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.56□□□□□ -0.08
Trim63Q38HM4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim63Q38HM4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim63Q38HM4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim63Q38HM4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim63Q38HM4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trim63Q38HM4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms