Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm25990-201ENSMUST00000102440 86 ntBASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Mir7023-201ENSMUST00000185093 64 ntBASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Gm13418-201ENSMUST00000119097 944 ntBASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 AC124549.3-201ENSMUST00000225541 367 ntBASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ush2AQ2QI47 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.41□□□□□ -0.9
Ush2AQ2QI47 CT009713.7-201ENSMUST00000224689 571 ntBASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Gm45640-201ENSMUST00000210665 1896 ntBASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 AC108858.1-201ENSMUST00000228461 1498 ntBASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Gm11780-201ENSMUST00000136880 516 ntBASIC9.41□□□□□ -0.9
Ush2AQ2QI47 AC153794.1-201ENSMUST00000169148 126 ntBASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ush2AQ2QI47 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Gm24841-201ENSMUST00000158676 357 ntBASIC9.4□□□□□ -0.9
Ush2AQ2QI47 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms