Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SobpQ0P5V2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SobpQ0P5V2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SobpQ0P5V2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SobpQ0P5V2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SobpQ0P5V2 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.08■□□□□ 0.81
SobpQ0P5V2 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.08■□□□□ 0.81
SobpQ0P5V2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SobpQ0P5V2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SobpQ0P5V2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SobpQ0P5V2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SobpQ0P5V2 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.08■□□□□ 0.81
SobpQ0P5V2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SobpQ0P5V2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SobpQ0P5V2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SobpQ0P5V2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SobpQ0P5V2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SobpQ0P5V2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SobpQ0P5V2 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.08■□□□□ 0.8
SobpQ0P5V2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SobpQ0P5V2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SobpQ0P5V2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SobpQ0P5V2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.07■□□□□ 0.8
SobpQ0P5V2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SobpQ0P5V2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SobpQ0P5V2 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.06■□□□□ 0.8
SobpQ0P5V2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SobpQ0P5V2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SobpQ0P5V2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SobpQ0P5V2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SobpQ0P5V2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SobpQ0P5V2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SobpQ0P5V2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SobpQ0P5V2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SobpQ0P5V2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SobpQ0P5V2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.05■□□□□ 0.8
SobpQ0P5V2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SobpQ0P5V2 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.05■□□□□ 0.8
SobpQ0P5V2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SobpQ0P5V2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SobpQ0P5V2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SobpQ0P5V2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SobpQ0P5V2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SobpQ0P5V2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.04■□□□□ 0.8
SobpQ0P5V2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SobpQ0P5V2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SobpQ0P5V2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SobpQ0P5V2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SobpQ0P5V2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.04■□□□□ 0.8
SobpQ0P5V2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SobpQ0P5V2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SobpQ0P5V2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SobpQ0P5V2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SobpQ0P5V2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SobpQ0P5V2 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.03■□□□□ 0.8
SobpQ0P5V2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.03■□□□□ 0.8
SobpQ0P5V2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.03■□□□□ 0.8
SobpQ0P5V2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SobpQ0P5V2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SobpQ0P5V2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SobpQ0P5V2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SobpQ0P5V2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SobpQ0P5V2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SobpQ0P5V2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SobpQ0P5V2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SobpQ0P5V2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SobpQ0P5V2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SobpQ0P5V2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SobpQ0P5V2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SobpQ0P5V2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms