Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf1Q07802 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf1Q07802 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf1Q07802 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf1Q07802 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ebf1Q07802 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Ebf1Q07802 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ebf1Q07802 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ebf1Q07802 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Gm6345-202ENSMUST00000180900 204 ntBASIC17.72■□□□□ 0.43
Ebf1Q07802 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Ebf1Q07802 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Fst-202ENSMUST00000223640 2612 ntBASIC17.72■□□□□ 0.43
Ebf1Q07802 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf1Q07802 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ebf1Q07802 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ebf1Q07802 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Ebf1Q07802 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
Ebf1Q07802 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ebf1Q07802 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ebf1Q07802 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.71■□□□□ 0.43
Ebf1Q07802 Gm10517-202ENSMUST00000192970 758 ntBASIC17.71■□□□□ 0.43
Ebf1Q07802 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.71■□□□□ 0.43
Ebf1Q07802 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.71■□□□□ 0.43
Ebf1Q07802 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ebf1Q07802 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf1Q07802 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ebf1Q07802 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ebf1Q07802 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf1Q07802 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf1Q07802 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.7■□□□□ 0.42
Ebf1Q07802 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf1Q07802 Gm2274-201ENSMUST00000184539 609 ntBASIC17.7■□□□□ 0.42
Ebf1Q07802 Gm38027-201ENSMUST00000192315 235 ntBASIC17.7■□□□□ 0.42
Ebf1Q07802 Gm33142-201ENSMUST00000193913 867 ntBASIC17.7■□□□□ 0.42
Ebf1Q07802 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.7■□□□□ 0.42
Ebf1Q07802 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf1Q07802 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ebf1Q07802 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf1Q07802 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ebf1Q07802 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf1Q07802 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf1Q07802 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf1Q07802 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf1Q07802 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.7■□□□□ 0.42
Ebf1Q07802 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Ebf1Q07802 Gm12085-201ENSMUST00000119263 940 ntBASIC17.69■□□□□ 0.42
Ebf1Q07802 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf1Q07802 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf1Q07802 Mir5130-201ENSMUST00000175160 84 ntBASIC17.69■□□□□ 0.42
Ebf1Q07802 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Ebf1Q07802 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.69■□□□□ 0.42
Ebf1Q07802 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf1Q07802 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ebf1Q07802 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf1Q07802 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.69■□□□□ 0.42
Ebf1Q07802 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf1Q07802 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ebf1Q07802 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.68■□□□□ 0.42
Ebf1Q07802 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.68■□□□□ 0.42
Ebf1Q07802 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ebf1Q07802 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ebf1Q07802 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.68■□□□□ 0.42
Ebf1Q07802 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.68■□□□□ 0.42
Ebf1Q07802 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf1Q07802 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf1Q07802 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms