Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
PrkdcP97313 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PrkdcP97313 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.08□□□□□ -0.48
PrkdcP97313 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.08□□□□□ -0.48
PrkdcP97313 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.08□□□□□ -0.48
PrkdcP97313 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PrkdcP97313 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PrkdcP97313 Gm27321-201ENSMUST00000185021 205 ntBASIC12.08□□□□□ -0.48
PrkdcP97313 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
PrkdcP97313 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PrkdcP97313 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PrkdcP97313 Gm12644-201ENSMUST00000119935 606 ntBASIC12.08□□□□□ -0.48
PrkdcP97313 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
PrkdcP97313 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PrkdcP97313 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Gm8097-201ENSMUST00000117903 829 ntBASIC12.07□□□□□ -0.48
PrkdcP97313 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.07□□□□□ -0.48
PrkdcP97313 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.07□□□□□ -0.48
PrkdcP97313 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
PrkdcP97313 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
PrkdcP97313 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PrkdcP97313 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
PrkdcP97313 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.06□□□□□ -0.48
PrkdcP97313 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
PrkdcP97313 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
PrkdcP97313 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.06□□□□□ -0.48
PrkdcP97313 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.06□□□□□ -0.48
PrkdcP97313 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PrkdcP97313 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.05□□□□□ -0.48
PrkdcP97313 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.05□□□□□ -0.48
PrkdcP97313 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.05□□□□□ -0.48
PrkdcP97313 Gm6376-201ENSMUST00000209407 580 ntBASIC12.05□□□□□ -0.48
PrkdcP97313 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.05□□□□□ -0.48
PrkdcP97313 Chchd1-203ENSMUST00000224633 557 ntBASIC12.05□□□□□ -0.48
PrkdcP97313 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PrkdcP97313 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PrkdcP97313 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PrkdcP97313 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.05□□□□□ -0.48
PrkdcP97313 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
PrkdcP97313 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
PrkdcP97313 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.05□□□□□ -0.48
PrkdcP97313 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.05□□□□□ -0.48
PrkdcP97313 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PrkdcP97313 Gm2213-201ENSMUST00000197485 688 ntBASIC12.05□□□□□ -0.48
PrkdcP97313 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
PrkdcP97313 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PrkdcP97313 Gm6296-201ENSMUST00000222599 943 ntBASIC12.05□□□□□ -0.48
PrkdcP97313 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PrkdcP97313 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PrkdcP97313 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC12.04□□□□□ -0.48
PrkdcP97313 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.04□□□□□ -0.48
PrkdcP97313 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PrkdcP97313 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Gm27867-201ENSMUST00000184778 125 ntBASIC12.04□□□□□ -0.48
PrkdcP97313 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.04□□□□□ -0.48
PrkdcP97313 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms