Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim43cP86449 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim43cP86449 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Trim43cP86449 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.07■□□□□ 0.64
Trim43cP86449 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.07■□□□□ 0.64
Trim43cP86449 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim43cP86449 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim43cP86449 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.06■□□□□ 0.64
Trim43cP86449 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43cP86449 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43cP86449 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.06■□□□□ 0.64
Trim43cP86449 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43cP86449 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43cP86449 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43cP86449 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43cP86449 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim43cP86449 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43cP86449 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Trim43cP86449 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43cP86449 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim43cP86449 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.05■□□□□ 0.64
Trim43cP86449 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43cP86449 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43cP86449 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43cP86449 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim43cP86449 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43cP86449 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim43cP86449 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43cP86449 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43cP86449 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43cP86449 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43cP86449 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim43cP86449 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43cP86449 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.04■□□□□ 0.64
Trim43cP86449 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim43cP86449 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim43cP86449 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43cP86449 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43cP86449 Gm8520-201ENSMUST00000186517 868 ntBASIC19.04■□□□□ 0.64
Trim43cP86449 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43cP86449 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43cP86449 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43cP86449 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim43cP86449 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43cP86449 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43cP86449 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43cP86449 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim43cP86449 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43cP86449 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43cP86449 Gm10517-202ENSMUST00000192970 758 ntBASIC19.03■□□□□ 0.64
Trim43cP86449 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim43cP86449 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.03■□□□□ 0.64
Trim43cP86449 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim43cP86449 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43cP86449 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim43cP86449 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43cP86449 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43cP86449 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43cP86449 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trim43cP86449 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim43cP86449 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43cP86449 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.02■□□□□ 0.64
Trim43cP86449 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.02■□□□□ 0.64
Trim43cP86449 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43cP86449 Gm12382-201ENSMUST00000122005 922 ntBASIC19.02■□□□□ 0.64
Trim43cP86449 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43cP86449 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.02■□□□□ 0.64
Trim43cP86449 Gm4974-201ENSMUST00000209974 875 ntBASIC19.02■□□□□ 0.64
Trim43cP86449 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.02■□□□□ 0.64
Trim43cP86449 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43cP86449 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43cP86449 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43cP86449 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Trim43cP86449 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Trim43cP86449 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43cP86449 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.01■□□□□ 0.63
Trim43cP86449 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43cP86449 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim43cP86449 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43cP86449 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.01■□□□□ 0.63
Trim43cP86449 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43cP86449 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43cP86449 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43cP86449 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim43cP86449 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43cP86449 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43cP86449 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43cP86449 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43cP86449 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim43cP86449 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43cP86449 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms