Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.04■□□□□ 0.64
CiitaP79621 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CiitaP79621 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CiitaP79621 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CiitaP79621 Gm7977-201ENSMUST00000193787 748 ntBASIC19.04■□□□□ 0.64
CiitaP79621 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.04■□□□□ 0.64
CiitaP79621 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CiitaP79621 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CiitaP79621 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CiitaP79621 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CiitaP79621 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.03■□□□□ 0.64
CiitaP79621 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.03■□□□□ 0.64
CiitaP79621 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CiitaP79621 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CiitaP79621 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CiitaP79621 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CiitaP79621 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CiitaP79621 Gm7638-201ENSMUST00000121348 967 ntBASIC19.02■□□□□ 0.64
CiitaP79621 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.02■□□□□ 0.64
CiitaP79621 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CiitaP79621 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CiitaP79621 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CiitaP79621 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CiitaP79621 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CiitaP79621 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.02■□□□□ 0.64
CiitaP79621 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CiitaP79621 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CiitaP79621 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CiitaP79621 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
CiitaP79621 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CiitaP79621 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CiitaP79621 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CiitaP79621 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.01■□□□□ 0.63
CiitaP79621 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.01■□□□□ 0.63
CiitaP79621 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.01■□□□□ 0.63
CiitaP79621 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CiitaP79621 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CiitaP79621 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CiitaP79621 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CiitaP79621 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CiitaP79621 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CiitaP79621 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19■□□□□ 0.63
CiitaP79621 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19■□□□□ 0.63
CiitaP79621 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CiitaP79621 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CiitaP79621 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CiitaP79621 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19■□□□□ 0.63
CiitaP79621 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CiitaP79621 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19■□□□□ 0.63
CiitaP79621 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CiitaP79621 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CiitaP79621 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CiitaP79621 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CiitaP79621 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CiitaP79621 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
CiitaP79621 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.99■□□□□ 0.63
CiitaP79621 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CiitaP79621 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CiitaP79621 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CiitaP79621 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CiitaP79621 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CiitaP79621 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CiitaP79621 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CiitaP79621 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CiitaP79621 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.98■□□□□ 0.63
CiitaP79621 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.98■□□□□ 0.63
CiitaP79621 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.98■□□□□ 0.63
CiitaP79621 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CiitaP79621 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CiitaP79621 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CiitaP79621 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms