Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.47■□□□□ 0.39
Ldb1P70662 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Ldb1P70662 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb1P70662 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ldb1P70662 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb1P70662 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb1P70662 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb1P70662 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb1P70662 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb1P70662 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ldb1P70662 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
Ldb1P70662 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Ldb1P70662 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Gm13158-201ENSMUST00000122007 736 ntBASIC17.46■□□□□ 0.39
Ldb1P70662 Trmt13-210ENSMUST00000198454 880 ntBASIC17.46■□□□□ 0.39
Ldb1P70662 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ldb1P70662 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ldb1P70662 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Ldb1P70662 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.45■□□□□ 0.38
Ldb1P70662 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.45■□□□□ 0.38
Ldb1P70662 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.45■□□□□ 0.38
Ldb1P70662 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.45■□□□□ 0.38
Ldb1P70662 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.45■□□□□ 0.38
Ldb1P70662 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.45■□□□□ 0.38
Ldb1P70662 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ldb1P70662 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.45■□□□□ 0.38
Ldb1P70662 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ldb1P70662 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ldb1P70662 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ldb1P70662 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ldb1P70662 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ldb1P70662 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.44■□□□□ 0.38
Ldb1P70662 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.44■□□□□ 0.38
Ldb1P70662 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ldb1P70662 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ldb1P70662 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
Ldb1P70662 Gm10653-202ENSMUST00000139570 835 ntBASIC17.43■□□□□ 0.38
Ldb1P70662 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.43■□□□□ 0.38
Ldb1P70662 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ldb1P70662 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb1P70662 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb1P70662 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb1P70662 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ldb1P70662 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.42■□□□□ 0.38
Ldb1P70662 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.42■□□□□ 0.38
Ldb1P70662 Mir6349-201ENSMUST00000184059 97 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms