Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Gm13401-201ENSMUST00000117074 291 ntBASIC16.41■□□□□ 0.22
Six5P70178 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six5P70178 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Six5P70178 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Gm13168-201ENSMUST00000121771 632 ntBASIC16.4■□□□□ 0.22
Six5P70178 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.4■□□□□ 0.22
Six5P70178 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Gm6576-201ENSMUST00000169678 883 ntBASIC16.4■□□□□ 0.22
Six5P70178 Gm42545-201ENSMUST00000202755 922 ntBASIC16.4■□□□□ 0.22
Six5P70178 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Six5P70178 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six5P70178 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Six5P70178 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Six5P70178 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six5P70178 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six5P70178 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six5P70178 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Six5P70178 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Six5P70178 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six5P70178 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six5P70178 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six5P70178 Gm37292-201ENSMUST00000192062 758 ntBASIC16.39■□□□□ 0.21
Six5P70178 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.39■□□□□ 0.21
Six5P70178 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.39■□□□□ 0.21
Six5P70178 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six5P70178 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six5P70178 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.39■□□□□ 0.21
Six5P70178 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Six5P70178 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.39■□□□□ 0.21
Six5P70178 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Gm12382-201ENSMUST00000122005 922 ntBASIC16.38■□□□□ 0.21
Six5P70178 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Six5P70178 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.38■□□□□ 0.21
Six5P70178 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six5P70178 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Six5P70178 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Six5P70178 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.37■□□□□ 0.21
Six5P70178 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Six5P70178 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Six5P70178 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Six5P70178 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.37■□□□□ 0.21
Six5P70178 Gm10698-201ENSMUST00000182663 604 ntBASIC16.37■□□□□ 0.21
Six5P70178 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Six5P70178 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Six5P70178 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six5P70178 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms