Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Crnkl1P63154 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.35■□□□□ 0.37
Crnkl1P63154 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Crnkl1P63154 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Crnkl1P63154 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.35■□□□□ 0.37
Crnkl1P63154 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Crnkl1P63154 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crnkl1P63154 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crnkl1P63154 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crnkl1P63154 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Crnkl1P63154 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.34■□□□□ 0.37
Crnkl1P63154 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.34■□□□□ 0.37
Crnkl1P63154 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Crnkl1P63154 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.34■□□□□ 0.37
Crnkl1P63154 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Crnkl1P63154 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crnkl1P63154 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crnkl1P63154 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crnkl1P63154 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crnkl1P63154 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crnkl1P63154 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Crnkl1P63154 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Crnkl1P63154 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Crnkl1P63154 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Crnkl1P63154 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Crnkl1P63154 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Crnkl1P63154 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crnkl1P63154 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crnkl1P63154 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Crnkl1P63154 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Crnkl1P63154 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.33■□□□□ 0.36
Crnkl1P63154 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.33■□□□□ 0.36
Crnkl1P63154 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crnkl1P63154 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.33■□□□□ 0.36
Crnkl1P63154 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Crnkl1P63154 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Crnkl1P63154 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Crnkl1P63154 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.32■□□□□ 0.36
Crnkl1P63154 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.32■□□□□ 0.36
Crnkl1P63154 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Crnkl1P63154 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Gm42642-201ENSMUST00000200683 355 ntBASIC17.32■□□□□ 0.36
Crnkl1P63154 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Crnkl1P63154 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crnkl1P63154 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crnkl1P63154 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crnkl1P63154 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crnkl1P63154 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Crnkl1P63154 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crnkl1P63154 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crnkl1P63154 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crnkl1P63154 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Crnkl1P63154 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crnkl1P63154 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crnkl1P63154 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crnkl1P63154 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Crnkl1P63154 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms