Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Lhx1P63006 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lhx1P63006 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Lhx1P63006 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx1P63006 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lhx1P63006 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lhx1P63006 Gm27463-201ENSMUST00000183569 57 ntBASIC17.25■□□□□ 0.35
Lhx1P63006 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.25■□□□□ 0.35
Lhx1P63006 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.25■□□□□ 0.35
Lhx1P63006 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lhx1P63006 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lhx1P63006 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Lhx1P63006 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Lhx1P63006 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx1P63006 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lhx1P63006 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx1P63006 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lhx1P63006 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lhx1P63006 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Lhx1P63006 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lhx1P63006 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.24■□□□□ 0.35
Lhx1P63006 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Lhx1P63006 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.24■□□□□ 0.35
Lhx1P63006 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Lhx1P63006 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx1P63006 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.23■□□□□ 0.35
Lhx1P63006 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx1P63006 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lhx1P63006 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.22■□□□□ 0.35
Lhx1P63006 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.22■□□□□ 0.35
Lhx1P63006 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.22■□□□□ 0.35
Lhx1P63006 Gm43799-201ENSMUST00000201845 579 ntBASIC17.22■□□□□ 0.35
Lhx1P63006 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.22■□□□□ 0.35
Lhx1P63006 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx1P63006 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Lhx1P63006 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Gm6433-201ENSMUST00000118634 875 ntBASIC17.21■□□□□ 0.35
Lhx1P63006 Mir8112-201ENSMUST00000184382 131 ntBASIC17.21■□□□□ 0.35
Lhx1P63006 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.21■□□□□ 0.35
Lhx1P63006 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.21■□□□□ 0.35
Lhx1P63006 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx1P63006 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lhx1P63006 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Lhx1P63006 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx1P63006 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.2■□□□□ 0.34
Lhx1P63006 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx1P63006 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Lhx1P63006 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx1P63006 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms