Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ybx1P62960 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ybx1P62960 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.99■□□□□ 0.47
Ybx1P62960 Gm7370-201ENSMUST00000219471 767 ntBASIC17.99■□□□□ 0.47
Ybx1P62960 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ybx1P62960 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ybx1P62960 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ybx1P62960 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ybx1P62960 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ybx1P62960 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ybx1P62960 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.98■□□□□ 0.47
Ybx1P62960 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ybx1P62960 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.97■□□□□ 0.47
Ybx1P62960 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Gm16061-201ENSMUST00000122167 857 ntBASIC17.97■□□□□ 0.47
Ybx1P62960 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.97■□□□□ 0.47
Ybx1P62960 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Ybx1P62960 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ybx1P62960 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ybx1P62960 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ybx1P62960 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ybx1P62960 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ybx1P62960 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ybx1P62960 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ybx1P62960 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ybx1P62960 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ybx1P62960 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ybx1P62960 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ybx1P62960 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.96■□□□□ 0.47
Ybx1P62960 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ybx1P62960 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ybx1P62960 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ybx1P62960 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.96■□□□□ 0.47
Ybx1P62960 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ybx1P62960 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.95■□□□□ 0.46
Ybx1P62960 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.95■□□□□ 0.46
Ybx1P62960 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.95■□□□□ 0.46
Ybx1P62960 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.95■□□□□ 0.46
Ybx1P62960 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ybx1P62960 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ybx1P62960 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Ybx1P62960 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ybx1P62960 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ybx1P62960 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ybx1P62960 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ybx1P62960 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ybx1P62960 Gm14859-201ENSMUST00000117752 357 ntBASIC17.94■□□□□ 0.46
Ybx1P62960 Gm9103-201ENSMUST00000119371 405 ntBASIC17.94■□□□□ 0.46
Ybx1P62960 Gm7284-201ENSMUST00000131667 944 ntBASIC17.94■□□□□ 0.46
Ybx1P62960 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ybx1P62960 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ybx1P62960 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ybx1P62960 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ybx1P62960 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ybx1P62960 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Gm17661-201ENSMUST00000170317 270 ntBASIC17.93■□□□□ 0.46
Ybx1P62960 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.93■□□□□ 0.46
Ybx1P62960 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
Ybx1P62960 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ybx1P62960 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ybx1P62960 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ybx1P62960 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms