Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rpl39P62892 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.54□□□□□ -0.4
Rpl39P62892 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Rpl39P62892 Gm26833-201ENSMUST00000180899 440 ntBASIC12.54□□□□□ -0.4
Rpl39P62892 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.54□□□□□ -0.4
Rpl39P62892 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.54□□□□□ -0.4
Rpl39P62892 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.54□□□□□ -0.4
Rpl39P62892 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rpl39P62892 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rpl39P62892 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Rpl39P62892 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rpl39P62892 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpl39P62892 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.53□□□□□ -0.4
Rpl39P62892 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpl39P62892 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rpl39P62892 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rpl39P62892 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rpl39P62892 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rpl39P62892 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rpl39P62892 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl39P62892 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rpl39P62892 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl39P62892 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Rpl39P62892 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.52□□□□□ -0.4
Rpl39P62892 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl39P62892 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl39P62892 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl39P62892 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl39P62892 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl39P62892 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl39P62892 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rpl39P62892 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rpl39P62892 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Gm21956-201ENSMUST00000179946 522 ntBASIC12.52□□□□□ -0.41
Rpl39P62892 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.52□□□□□ -0.41
Rpl39P62892 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.52□□□□□ -0.41
Rpl39P62892 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl39P62892 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rpl39P62892 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpl39P62892 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpl39P62892 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rpl39P62892 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rpl39P62892 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl39P62892 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpl39P62892 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms