Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp46P62069 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp46P62069 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Usp46P62069 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp46P62069 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.33■□□□□ 0.53
Usp46P62069 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp46P62069 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp46P62069 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.33■□□□□ 0.52
Usp46P62069 Gm11539-201ENSMUST00000119837 557 ntBASIC18.33■□□□□ 0.52
Usp46P62069 Gm13436-201ENSMUST00000120418 567 ntBASIC18.33■□□□□ 0.52
Usp46P62069 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp46P62069 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp46P62069 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp46P62069 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Usp46P62069 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Usp46P62069 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp46P62069 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp46P62069 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp46P62069 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Usp46P62069 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.32■□□□□ 0.52
Usp46P62069 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Usp46P62069 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Usp46P62069 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.32■□□□□ 0.52
Usp46P62069 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.32■□□□□ 0.52
Usp46P62069 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp46P62069 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Usp46P62069 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Usp46P62069 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.31■□□□□ 0.52
Usp46P62069 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.31■□□□□ 0.52
Usp46P62069 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Gm29791-202ENSMUST00000207888 369 ntBASIC18.31■□□□□ 0.52
Usp46P62069 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Usp46P62069 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp46P62069 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp46P62069 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp46P62069 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Usp46P62069 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp46P62069 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Gm6433-201ENSMUST00000118634 875 ntBASIC18.3■□□□□ 0.52
Usp46P62069 Gm13559-201ENSMUST00000120476 863 ntBASIC18.3■□□□□ 0.52
Usp46P62069 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.3■□□□□ 0.52
Usp46P62069 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.3■□□□□ 0.52
Usp46P62069 Gm4974-201ENSMUST00000209974 875 ntBASIC18.3■□□□□ 0.52
Usp46P62069 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Usp46P62069 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp46P62069 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Usp46P62069 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.29■□□□□ 0.52
Usp46P62069 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.29■□□□□ 0.52
Usp46P62069 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Usp46P62069 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms