Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.19□□□□□ -0.14
Lmo4P61969 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.19□□□□□ -0.14
Lmo4P61969 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.19□□□□□ -0.14
Lmo4P61969 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.19□□□□□ -0.14
Lmo4P61969 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.19□□□□□ -0.14
Lmo4P61969 Gm17661-201ENSMUST00000170317 270 ntBASIC14.19□□□□□ -0.14
Lmo4P61969 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.19□□□□□ -0.14
Lmo4P61969 Mir8112-201ENSMUST00000184382 131 ntBASIC14.19□□□□□ -0.14
Lmo4P61969 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.19□□□□□ -0.14
Lmo4P61969 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lmo4P61969 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.19□□□□□ -0.14
Lmo4P61969 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Lmo4P61969 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lmo4P61969 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lmo4P61969 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.18□□□□□ -0.14
Lmo4P61969 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.18□□□□□ -0.14
Lmo4P61969 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lmo4P61969 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lmo4P61969 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.18□□□□□ -0.14
Lmo4P61969 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.18□□□□□ -0.14
Lmo4P61969 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lmo4P61969 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.17□□□□□ -0.14
Lmo4P61969 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Lmo4P61969 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lmo4P61969 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Lmo4P61969 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lmo4P61969 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.17□□□□□ -0.14
Lmo4P61969 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Lmo4P61969 Gm27389-201ENSMUST00000183622 195 ntBASIC14.17□□□□□ -0.14
Lmo4P61969 Mir1668-201ENSMUST00000184114 107 ntBASIC14.17□□□□□ -0.14
Lmo4P61969 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.17□□□□□ -0.14
Lmo4P61969 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.17□□□□□ -0.14
Lmo4P61969 Gm21559-201ENSMUST00000220638 855 ntBASIC14.17□□□□□ -0.14
Lmo4P61969 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lmo4P61969 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Gm8587-201ENSMUST00000076538 843 ntBASIC14.17□□□□□ -0.14
Lmo4P61969 Gm10819-201ENSMUST00000099988 561 ntBASIC14.17□□□□□ -0.14
Lmo4P61969 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lmo4P61969 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.17□□□□□ -0.14
Lmo4P61969 Iqck-206ENSMUST00000208658 2891 ntBASIC14.16□□□□□ -0.14
Lmo4P61969 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.16□□□□□ -0.14
Lmo4P61969 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Lmo4P61969 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Gm25016-201ENSMUST00000158399 131 ntBASIC14.16□□□□□ -0.14
Lmo4P61969 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lmo4P61969 Gm33142-201ENSMUST00000193913 867 ntBASIC14.16□□□□□ -0.14
Lmo4P61969 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Lmo4P61969 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms