Protein–RNA interactions for Protein: P59438

Hps5, Hermansky-Pudlak syndrome 5 protein homolog, mousemouse

Predictions only

Length 1,126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps5P59438 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hps5P59438 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hps5P59438 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hps5P59438 Gm18959-201ENSMUST00000208954 655 ntBASIC19.64■□□□□ 0.73
Hps5P59438 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps5P59438 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.64■□□□□ 0.73
Hps5P59438 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps5P59438 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps5P59438 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps5P59438 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hps5P59438 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps5P59438 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps5P59438 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps5P59438 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hps5P59438 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hps5P59438 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hps5P59438 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hps5P59438 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.63■□□□□ 0.73
Hps5P59438 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Gm3375-201ENSMUST00000203929 796 ntBASIC19.63■□□□□ 0.73
Hps5P59438 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Hps5P59438 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hps5P59438 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Hps5P59438 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps5P59438 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.62■□□□□ 0.73
Hps5P59438 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.62■□□□□ 0.73
Hps5P59438 Timm23-208ENSMUST00000226683 750 ntBASIC19.62■□□□□ 0.73
Hps5P59438 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hps5P59438 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hps5P59438 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps5P59438 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
Hps5P59438 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps5P59438 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.61■□□□□ 0.73
Hps5P59438 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps5P59438 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Hps5P59438 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hps5P59438 Gm18032-201ENSMUST00000222541 538 ntBASIC19.61■□□□□ 0.73
Hps5P59438 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.61■□□□□ 0.73
Hps5P59438 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.61■□□□□ 0.73
Hps5P59438 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps5P59438 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps5P59438 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps5P59438 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps5P59438 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hps5P59438 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps5P59438 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.6■□□□□ 0.73
Hps5P59438 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hps5P59438 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps5P59438 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Hps5P59438 Gm12382-201ENSMUST00000122005 922 ntBASIC19.6■□□□□ 0.73
Hps5P59438 Gm44771-201ENSMUST00000206975 626 ntBASIC19.6■□□□□ 0.73
Hps5P59438 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.6■□□□□ 0.73
Hps5P59438 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.6■□□□□ 0.73
Hps5P59438 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps5P59438 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hps5P59438 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps5P59438 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps5P59438 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps5P59438 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.6■□□□□ 0.73
Hps5P59438 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hps5P59438 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hps5P59438 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hps5P59438 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.59■□□□□ 0.73
Hps5P59438 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.59■□□□□ 0.73
Hps5P59438 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.59■□□□□ 0.73
Hps5P59438 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.59■□□□□ 0.73
Hps5P59438 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.59■□□□□ 0.73
Hps5P59438 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps5P59438 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms