Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.83□□□□□ -0.04
Cpne2P59108 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne2P59108 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cpne2P59108 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne2P59108 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne2P59108 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne2P59108 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne2P59108 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne2P59108 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne2P59108 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne2P59108 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne2P59108 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.82□□□□□ -0.04
Cpne2P59108 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.82□□□□□ -0.04
Cpne2P59108 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Cpne2P59108 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.82□□□□□ -0.04
Cpne2P59108 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cpne2P59108 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.82□□□□□ -0.04
Cpne2P59108 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne2P59108 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne2P59108 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne2P59108 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne2P59108 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne2P59108 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Cpne2P59108 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne2P59108 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne2P59108 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
Cpne2P59108 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.81□□□□□ -0.04
Cpne2P59108 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne2P59108 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne2P59108 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cpne2P59108 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cpne2P59108 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne2P59108 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.8□□□□□ -0.04
Cpne2P59108 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpne2P59108 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpne2P59108 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.8□□□□□ -0.04
Cpne2P59108 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpne2P59108 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.8□□□□□ -0.04
Cpne2P59108 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Cpne2P59108 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.8□□□□□ -0.04
Cpne2P59108 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne2P59108 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.8□□□□□ -0.04
Cpne2P59108 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cpne2P59108 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpne2P59108 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpne2P59108 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpne2P59108 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.79□□□□□ -0.04
Cpne2P59108 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.79□□□□□ -0.04
Cpne2P59108 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cpne2P59108 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Reep4-203ENSMUST00000226563 1444 ntBASIC14.79□□□□□ -0.04
Cpne2P59108 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.79□□□□□ -0.04
Cpne2P59108 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpne2P59108 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne2P59108 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne2P59108 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cpne2P59108 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms