Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Uchl4P58321 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Uchl4P58321 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Uchl4P58321 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Uchl4P58321 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Uchl4P58321 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Uchl4P58321 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
Uchl4P58321 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Uchl4P58321 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.63■□□□□ 0.57
Uchl4P58321 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uchl4P58321 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Uchl4P58321 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.62■□□□□ 0.57
Uchl4P58321 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Uchl4P58321 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.62■□□□□ 0.57
Uchl4P58321 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.62■□□□□ 0.57
Uchl4P58321 Gm5417-201ENSMUST00000079706 384 ntBASIC18.62■□□□□ 0.57
Uchl4P58321 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.62■□□□□ 0.57
Uchl4P58321 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.62■□□□□ 0.57
Uchl4P58321 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Uchl4P58321 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Uchl4P58321 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.61■□□□□ 0.57
Uchl4P58321 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.61■□□□□ 0.57
Uchl4P58321 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uchl4P58321 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Uchl4P58321 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.6■□□□□ 0.57
Uchl4P58321 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.6■□□□□ 0.57
Uchl4P58321 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Uchl4P58321 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Uchl4P58321 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Uchl4P58321 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Uchl4P58321 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Uchl4P58321 Gm13401-201ENSMUST00000117074 291 ntBASIC18.6■□□□□ 0.57
Uchl4P58321 Gm15565-201ENSMUST00000118890 427 ntBASIC18.6■□□□□ 0.57
Uchl4P58321 Gm10517-202ENSMUST00000192970 758 ntBASIC18.6■□□□□ 0.57
Uchl4P58321 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Uchl4P58321 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Uchl4P58321 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Uchl4P58321 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Gm11643-201ENSMUST00000119578 864 ntBASIC18.59■□□□□ 0.57
Uchl4P58321 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Gm29791-202ENSMUST00000207888 369 ntBASIC18.59■□□□□ 0.57
Uchl4P58321 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.59■□□□□ 0.57
Uchl4P58321 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.59■□□□□ 0.57
Uchl4P58321 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.59■□□□□ 0.57
Uchl4P58321 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Uchl4P58321 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.59■□□□□ 0.57
Uchl4P58321 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Uchl4P58321 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms