Protein–RNA interactions for Protein: P57784

Snrpa1, U2 small nuclear ribonucleoprotein A', mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrpa1P57784 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snrpa1P57784 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.24■□□□□ 0.99
Snrpa1P57784 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snrpa1P57784 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Snrpa1P57784 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snrpa1P57784 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snrpa1P57784 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.24■□□□□ 0.99
Snrpa1P57784 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snrpa1P57784 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snrpa1P57784 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snrpa1P57784 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snrpa1P57784 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snrpa1P57784 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snrpa1P57784 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.23■□□□□ 0.99
Snrpa1P57784 Gm7367-201ENSMUST00000057611 492 ntBASIC21.23■□□□□ 0.99
Snrpa1P57784 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snrpa1P57784 Iqck-206ENSMUST00000208658 2891 ntBASIC21.23■□□□□ 0.99
Snrpa1P57784 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snrpa1P57784 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Snrpa1P57784 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Snrpa1P57784 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snrpa1P57784 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrpa1P57784 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snrpa1P57784 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snrpa1P57784 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Snrpa1P57784 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.22■□□□□ 0.99
Snrpa1P57784 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrpa1P57784 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrpa1P57784 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snrpa1P57784 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.22■□□□□ 0.99
Snrpa1P57784 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snrpa1P57784 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.21■□□□□ 0.99
Snrpa1P57784 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Mir1668-201ENSMUST00000184114 107 ntBASIC21.21■□□□□ 0.99
Snrpa1P57784 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Snrpa1P57784 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
Snrpa1P57784 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrpa1P57784 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Snrpa1P57784 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Snrpa1P57784 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.2■□□□□ 0.98
Snrpa1P57784 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.2■□□□□ 0.98
Snrpa1P57784 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Snrpa1P57784 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrpa1P57784 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Snrpa1P57784 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Snrpa1P57784 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Snrpa1P57784 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Snrpa1P57784 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.19■□□□□ 0.98
Snrpa1P57784 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.19■□□□□ 0.98
Snrpa1P57784 Gm21559-201ENSMUST00000220638 855 ntBASIC21.19■□□□□ 0.98
Snrpa1P57784 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Snrpa1P57784 Gm8587-201ENSMUST00000076538 843 ntBASIC21.19■□□□□ 0.98
Snrpa1P57784 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.19■□□□□ 0.98
Snrpa1P57784 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrpa1P57784 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrpa1P57784 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrpa1P57784 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Snrpa1P57784 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrpa1P57784 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrpa1P57784 Gm27389-201ENSMUST00000183622 195 ntBASIC21.18■□□□□ 0.98
Snrpa1P57784 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.18■□□□□ 0.98
Snrpa1P57784 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.18■□□□□ 0.98
Snrpa1P57784 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrpa1P57784 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Snrpa1P57784 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrpa1P57784 Gm10819-201ENSMUST00000099988 561 ntBASIC21.18■□□□□ 0.98
Snrpa1P57784 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrpa1P57784 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Snrpa1P57784 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Snrpa1P57784 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.18■□□□□ 0.98
Snrpa1P57784 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrpa1P57784 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms