Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Sssca1P56873 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sssca1P56873 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Sssca1P56873 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.2□□□□□ -0.14
Sssca1P56873 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sssca1P56873 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Sssca1P56873 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Nespas-201ENSMUST00000143738 1083 ntBASIC14.19□□□□□ -0.14
Sssca1P56873 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.19□□□□□ -0.14
Sssca1P56873 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.19□□□□□ -0.14
Sssca1P56873 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.19□□□□□ -0.14
Sssca1P56873 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sssca1P56873 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sssca1P56873 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Sssca1P56873 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sssca1P56873 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Sssca1P56873 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.18□□□□□ -0.14
Sssca1P56873 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Sssca1P56873 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.18□□□□□ -0.14
Sssca1P56873 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sssca1P56873 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.18□□□□□ -0.14
Sssca1P56873 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.17□□□□□ -0.14
Sssca1P56873 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.17□□□□□ -0.14
Sssca1P56873 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sssca1P56873 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sssca1P56873 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sssca1P56873 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sssca1P56873 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sssca1P56873 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.17□□□□□ -0.14
Sssca1P56873 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.17□□□□□ -0.14
Sssca1P56873 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.17□□□□□ -0.14
Sssca1P56873 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sssca1P56873 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Sssca1P56873 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.16□□□□□ -0.14
Sssca1P56873 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sssca1P56873 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sssca1P56873 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sssca1P56873 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.15□□□□□ -0.14
Sssca1P56873 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms