Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccr8P56484 Gm8969-201ENSMUST00000199694 526 ntBASIC15.09■□□□□ 0.01
Ccr8P56484 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccr8P56484 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccr8P56484 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.08■□□□□ 0.01
Ccr8P56484 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccr8P56484 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccr8P56484 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.08■□□□□ 0.01
Ccr8P56484 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.08■□□□□ 0
Ccr8P56484 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ccr8P56484 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ccr8P56484 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.08■□□□□ 0
Ccr8P56484 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.08■□□□□ 0
Ccr8P56484 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccr8P56484 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccr8P56484 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccr8P56484 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccr8P56484 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccr8P56484 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ccr8P56484 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccr8P56484 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.07■□□□□ 0
Ccr8P56484 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Gm11643-201ENSMUST00000119578 864 ntBASIC15.07■□□□□ 0
Ccr8P56484 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.07■□□□□ 0
Ccr8P56484 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Ccr8P56484 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.07■□□□□ 0
Ccr8P56484 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccr8P56484 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.07■□□□□ 0
Ccr8P56484 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccr8P56484 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.06■□□□□ 0
Ccr8P56484 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccr8P56484 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccr8P56484 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.06■□□□□ 0
Ccr8P56484 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccr8P56484 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccr8P56484 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ccr8P56484 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Ccr8P56484 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ccr8P56484 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccr8P56484 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccr8P56484 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccr8P56484 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ccr8P56484 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccr8P56484 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.05■□□□□ -0
Ccr8P56484 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ccr8P56484 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Ccr8P56484 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccr8P56484 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccr8P56484 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccr8P56484 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccr8P56484 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccr8P56484 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.05■□□□□ -0
Ccr8P56484 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Ccr8P56484 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccr8P56484 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.04■□□□□ -0
Ccr8P56484 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.04■□□□□ -0
Ccr8P56484 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccr8P56484 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.04■□□□□ -0
Ccr8P56484 Gm20760-201ENSMUST00000179197 648 ntBASIC15.04■□□□□ -0
Ccr8P56484 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccr8P56484 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccr8P56484 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ccr8P56484 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms