Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NcanP55066 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NcanP55066 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
NcanP55066 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
NcanP55066 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.53■□□□□ 0.56
NcanP55066 Gm1401-201ENSMUST00000122048 772 ntBASIC18.53■□□□□ 0.56
NcanP55066 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NcanP55066 Gm10175-201ENSMUST00000086013 645 ntBASIC18.53■□□□□ 0.56
NcanP55066 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NcanP55066 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NcanP55066 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NcanP55066 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.52■□□□□ 0.56
NcanP55066 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NcanP55066 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NcanP55066 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NcanP55066 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.52■□□□□ 0.56
NcanP55066 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NcanP55066 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NcanP55066 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NcanP55066 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NcanP55066 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NcanP55066 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NcanP55066 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NcanP55066 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
NcanP55066 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NcanP55066 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NcanP55066 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NcanP55066 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NcanP55066 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NcanP55066 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NcanP55066 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NcanP55066 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NcanP55066 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.51■□□□□ 0.55
NcanP55066 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NcanP55066 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.51■□□□□ 0.55
NcanP55066 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NcanP55066 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.51■□□□□ 0.55
NcanP55066 Gm2756-201ENSMUST00000195851 400 ntBASIC18.51■□□□□ 0.55
NcanP55066 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NcanP55066 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NcanP55066 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.51■□□□□ 0.55
NcanP55066 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NcanP55066 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NcanP55066 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.51■□□□□ 0.55
NcanP55066 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NcanP55066 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NcanP55066 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NcanP55066 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NcanP55066 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.5■□□□□ 0.55
NcanP55066 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NcanP55066 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NcanP55066 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NcanP55066 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.5■□□□□ 0.55
NcanP55066 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NcanP55066 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.5■□□□□ 0.55
NcanP55066 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.5■□□□□ 0.55
NcanP55066 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NcanP55066 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NcanP55066 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NcanP55066 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NcanP55066 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NcanP55066 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NcanP55066 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.49■□□□□ 0.55
NcanP55066 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NcanP55066 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.49■□□□□ 0.55
NcanP55066 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NcanP55066 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.49■□□□□ 0.55
NcanP55066 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NcanP55066 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NcanP55066 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NcanP55066 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NcanP55066 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NcanP55066 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NcanP55066 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NcanP55066 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NcanP55066 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.49■□□□□ 0.55
NcanP55066 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NcanP55066 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.48■□□□□ 0.55
NcanP55066 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NcanP55066 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NcanP55066 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NcanP55066 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
NcanP55066 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NcanP55066 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NcanP55066 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NcanP55066 Gm23935-201ENSMUST00000102303 57 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms