Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacnb3P54285 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cacnb3P54285 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.46■□□□□ 0.87
Cacnb3P54285 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Cacnb3P54285 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Gm5587-201ENSMUST00000206270 674 ntBASIC20.46■□□□□ 0.87
Cacnb3P54285 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.46■□□□□ 0.87
Cacnb3P54285 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.46■□□□□ 0.87
Cacnb3P54285 Il3ra-202ENSMUST00000223589 738 ntBASIC20.46■□□□□ 0.87
Cacnb3P54285 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Grk6-206ENSMUST00000224995 2971 ntBASIC20.46■□□□□ 0.87
Cacnb3P54285 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacnb3P54285 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.45■□□□□ 0.86
Cacnb3P54285 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.45■□□□□ 0.86
Cacnb3P54285 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.45■□□□□ 0.86
Cacnb3P54285 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Gm27704-201ENSMUST00000185094 107 ntBASIC20.45■□□□□ 0.86
Cacnb3P54285 Gm29518-201ENSMUST00000190858 372 ntBASIC20.45■□□□□ 0.86
Cacnb3P54285 Gm37025-201ENSMUST00000195159 829 ntBASIC20.45■□□□□ 0.86
Cacnb3P54285 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacnb3P54285 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cacnb3P54285 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Cacnb3P54285 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Cacnb3P54285 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb3P54285 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.44■□□□□ 0.86
Cacnb3P54285 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.44■□□□□ 0.86
Cacnb3P54285 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb3P54285 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.44■□□□□ 0.86
Cacnb3P54285 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb3P54285 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.44■□□□□ 0.86
Cacnb3P54285 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cacnb3P54285 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb3P54285 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cacnb3P54285 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb3P54285 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cacnb3P54285 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb3P54285 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacnb3P54285 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb3P54285 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb3P54285 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cacnb3P54285 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cacnb3P54285 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.43■□□□□ 0.86
Cacnb3P54285 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.43■□□□□ 0.86
Cacnb3P54285 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.43■□□□□ 0.86
Cacnb3P54285 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb3P54285 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb3P54285 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb3P54285 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.43■□□□□ 0.86
Cacnb3P54285 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb3P54285 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacnb3P54285 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb3P54285 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb3P54285 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.42■□□□□ 0.86
Cacnb3P54285 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb3P54285 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb3P54285 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cacnb3P54285 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Cacnb3P54285 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb3P54285 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacnb3P54285 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb3P54285 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Cacnb3P54285 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb3P54285 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb3P54285 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cacnb3P54285 Gm17808-201ENSMUST00000200859 894 ntBASIC20.41■□□□□ 0.86
Cacnb3P54285 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Cacnb3P54285 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb3P54285 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Cacnb3P54285 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacnb3P54285 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb3P54285 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb3P54285 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb3P54285 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb3P54285 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.4■□□□□ 0.86
Cacnb3P54285 Idnk-204ENSMUST00000226010 1898 ntBASIC20.4■□□□□ 0.86
Cacnb3P54285 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb3P54285 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb3P54285 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb3P54285 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb3P54285 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.39■□□□□ 0.86
Cacnb3P54285 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Cacnb3P54285 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cacnb3P54285 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacnb3P54285 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms