Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox1P53783 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sox1P53783 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox1P53783 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox1P53783 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox1P53783 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.91■□□□□ 0.46
Sox1P53783 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox1P53783 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox1P53783 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sox1P53783 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.9■□□□□ 0.46
Sox1P53783 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Sox1P53783 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.9■□□□□ 0.46
Sox1P53783 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Sox1P53783 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Sox1P53783 Gm14057-201ENSMUST00000120631 482 ntBASIC17.9■□□□□ 0.46
Sox1P53783 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.9■□□□□ 0.46
Sox1P53783 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.9■□□□□ 0.46
Sox1P53783 Gm9731-201ENSMUST00000209480 747 ntBASIC17.9■□□□□ 0.46
Sox1P53783 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Sox1P53783 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sox1P53783 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sox1P53783 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.9■□□□□ 0.46
Sox1P53783 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sox1P53783 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox1P53783 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Sox1P53783 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sox1P53783 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sox1P53783 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.89■□□□□ 0.45
Sox1P53783 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.89■□□□□ 0.45
Sox1P53783 Gm12350-201ENSMUST00000121208 462 ntBASIC17.89■□□□□ 0.45
Sox1P53783 Gm7862-201ENSMUST00000121461 292 ntBASIC17.89■□□□□ 0.45
Sox1P53783 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.89■□□□□ 0.45
Sox1P53783 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.89■□□□□ 0.45
Sox1P53783 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sox1P53783 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Sox1P53783 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox1P53783 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sox1P53783 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.88■□□□□ 0.45
Sox1P53783 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox1P53783 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.88■□□□□ 0.45
Sox1P53783 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Sox1P53783 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.88■□□□□ 0.45
Sox1P53783 Gm4995-201ENSMUST00000117247 432 ntBASIC17.88■□□□□ 0.45
Sox1P53783 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
Sox1P53783 Gm43438-201ENSMUST00000198133 379 ntBASIC17.88■□□□□ 0.45
Sox1P53783 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox1P53783 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.88■□□□□ 0.45
Sox1P53783 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox1P53783 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.88■□□□□ 0.45
Sox1P53783 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox1P53783 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox1P53783 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Sox1P53783 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox1P53783 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox1P53783 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.87■□□□□ 0.45
Sox1P53783 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.87■□□□□ 0.45
Sox1P53783 Gm13401-201ENSMUST00000117074 291 ntBASIC17.87■□□□□ 0.45
Sox1P53783 Gm15467-201ENSMUST00000120582 445 ntBASIC17.87■□□□□ 0.45
Sox1P53783 Gm2756-201ENSMUST00000195851 400 ntBASIC17.87■□□□□ 0.45
Sox1P53783 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.87■□□□□ 0.45
Sox1P53783 Gm6296-201ENSMUST00000222599 943 ntBASIC17.87■□□□□ 0.45
Sox1P53783 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sox1P53783 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox1P53783 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sox1P53783 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sox1P53783 Notumos-201ENSMUST00000151998 2659 ntBASIC17.87■□□□□ 0.45
Sox1P53783 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox1P53783 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox1P53783 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox1P53783 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.86■□□□□ 0.45
Sox1P53783 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
Sox1P53783 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sox1P53783 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sox1P53783 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.86■□□□□ 0.45
Sox1P53783 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.86■□□□□ 0.45
Sox1P53783 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms