Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Pdx1P52946 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.35■□□□□ 0.37
Pdx1P52946 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pdx1P52946 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.35■□□□□ 0.37
Pdx1P52946 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdx1P52946 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pdx1P52946 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdx1P52946 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdx1P52946 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.34■□□□□ 0.37
Pdx1P52946 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdx1P52946 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdx1P52946 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdx1P52946 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdx1P52946 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdx1P52946 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.34■□□□□ 0.37
Pdx1P52946 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdx1P52946 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pdx1P52946 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdx1P52946 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdx1P52946 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdx1P52946 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdx1P52946 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdx1P52946 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdx1P52946 Mir8112-201ENSMUST00000184382 131 ntBASIC17.33■□□□□ 0.36
Pdx1P52946 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.33■□□□□ 0.36
Pdx1P52946 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.33■□□□□ 0.36
Pdx1P52946 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.33■□□□□ 0.36
Pdx1P52946 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdx1P52946 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdx1P52946 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.33■□□□□ 0.36
Pdx1P52946 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Pdx1P52946 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.32■□□□□ 0.36
Pdx1P52946 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pdx1P52946 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pdx1P52946 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pdx1P52946 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdx1P52946 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdx1P52946 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.32■□□□□ 0.36
Pdx1P52946 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdx1P52946 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdx1P52946 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdx1P52946 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pdx1P52946 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.32■□□□□ 0.36
Pdx1P52946 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdx1P52946 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdx1P52946 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdx1P52946 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdx1P52946 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdx1P52946 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdx1P52946 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Pdx1P52946 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.31■□□□□ 0.36
Pdx1P52946 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.31■□□□□ 0.36
Pdx1P52946 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdx1P52946 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdx1P52946 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdx1P52946 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdx1P52946 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdx1P52946 Gm10812-201ENSMUST00000099864 546 ntBASIC17.31■□□□□ 0.36
Pdx1P52946 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.31■□□□□ 0.36
Pdx1P52946 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.31■□□□□ 0.36
Pdx1P52946 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Pdx1P52946 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdx1P52946 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdx1P52946 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pdx1P52946 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdx1P52946 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.29■□□□□ 0.36
Pdx1P52946 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Mir1199-201ENSMUST00000117015 119 ntBASIC17.29■□□□□ 0.36
Pdx1P52946 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms